AXRE

// AXRE ECOSYSTEM

A digital X-ray of clinical logic.

AXRE scans the reasoning behind every model output and renders it as structured, traceable evidence. These are the repositories that build it — extraction, graph, reasoning, atlas.

// REPOSITORIES

6 repositories

  • axre-extract

    Private
    First stage

    Clinical NLP pipeline for axiomatic extraction. The first stage of the AXRE environment.

    • information-extraction
    • umls
    • hypergraph
    • entity-linking
    • snomed-ct
    • clinical-nlp
    • concept-normalization
    • biomedical-nlp
    • medical-nlp
    • gliner
    Python · DockerfileUpdated 3 days ago

  • CaseGraph

    Private
    Extraction only

    vignette2graph · clinical MCQ vignettes → UMLS-grounded typed hypergraphs (extraction only)

    • python
    • information-extraction
    • knowledge-graph
    • named-entity-recognition
    • help-wanted
    • umls
    • hypergraph
    • entity-linking
    • snomed-ct
    • predicate-logic
    • medcat
    • medical-qa
    • scispacy
    • typedb
    • biomedical-nlp
    • clinical-nlp
    • concept-normalization
    • medical-nlp
    Python · DockerfileUpdated last week

  • axre-reason

    Private
    Research phase

    AXRE ecosystem module — research phase

    Updated 3 days ago

  • axre-graph

    Private
    Research phase

    AXRE ecosystem module — research phase

    Updated 3 days ago

  • axre-atlas

    Private
    Research phase

    AXRE ecosystem module — research phase

    Updated 3 days ago

  • .github

    Private
    Org meta

    Organization-level defaults and shared community health files for AXRE.

    Updated 3 days ago